| OHPL | Ordered Homogeneity Pursuit Lasso for Group Variable Selection You-Wu Lin , Nan Xiao |
| RECA | Relevant Component Analysis for Supervised Distance Metric Learning Nan Xiao |
| ampir | Predict Antimicrobial Peptides Legana Fingerhut , Ira Cooke , Jinlong Zhang , Nan Xiao |
| ashr | Methods for Adaptive Shrinkage, using Empirical Bayes Matthew Stephens , Peter Carbonetto , Chaoxing Dai , David Gerard , Mengyin Lu , Lei Sun , Jason Willwerscheid , Nan Xiao , Mazon Zeng |
| biocompute | Create and Manipulate BioCompute Objects Soner Koc , Jeffrey Grover , Nan Xiao , Dennis Dean , Seven Bridges Genomics |
| boxly | Interactive Box Plot Benjamin Wang , Yujie Zhao , Yilong Zhang , Nan Xiao , Hiroaki Fukuda , Sarad Nepal , Madhusudhan Ginnaram , Venkatesh Burla , Merck Sharp & Dohme Corp |
| enpls | Ensemble Partial Least Squares Regression Nan Xiao , Dong-Sheng Cao , Miao-Zhu Li , Qing-Song Xu |
| forestly | Interactive Forest Plot Yilong Zhang , Benjamin Wang , Yujie Zhao , Nan Xiao , Xuan Deng , Merck Sharp & Dohme Corp |
| gMCPLite | Lightweight Graph Based Multiple Comparison Procedures Yalin Zhu , Yilong Zhang , Xuan Deng , Keaven Anderson , Nan Xiao , Kornelius Rohmeyer , Florian Klinglmueller , gMCP project contributors , Merck & Co. , Inc. , Rahway , NJ , USA , its affiliates |
| ggsci | Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2' Nan Xiao , Joshua Cook , Clara Jégousse , Miaozhu Li |
| grex | Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data Nan Xiao , Gao Wang , Lei Sun |
| gsDesign2 | Group Sequential Design with Non-Constant Effect Keaven Anderson , Yilong Zhang , Yujie Zhao , Jianxiao Yang , Nan Xiao , Amin Shirazi , Ruixue Wang , Yi Cui , Ping Yang , Xin Tong Li , Chenxiang Li , Hiroaki Fukuda , Hongtao Zhang , Yalin Zhu , John Blischak , Dickson Wanjau , Merck & Co. , Inc. , Rahway , NJ , USA , its affiliates |
| hdnom | Benchmarking and Visualization Toolkit for Penalized Cox Models Nan Xiao , Qing-Song Xu , Miao-Zhu Li , Frank Harrell , Sergej Potapov , Werner Adler , Matthias Schmid |
| lfda | Local Fisher Discriminant Analysis Yuan Tang , Wenxuan Li , Nan Xiao , Zachary Deane-Mayer |
| liftr | Containerize R Markdown Documents for Continuous Reproducibility Nan Xiao , Miao-Zhu Li , Teng-Fei Yin |
| metalite | ADaM Metadata Structure Yilong Zhang , Yujie Zhao , Nan Xiao , Benjamin Wang , Brian Lang , Howard Baek , Ruchitbhai Patel , Madhusudhan Ginnaram , Sarad Nepal , Venkatesh Burla , Merck Sharp & Dohme Corp |
| metalite.ae | Adverse Events Analysis Using 'metalite' Yilong Zhang , Yujie Zhao , Benjamin Wang , Nan Xiao , Sarad Nepal , Madhusudhan Ginnaram , Venkatesh Burla , Ruchitbhai Patel , Brian Lang , Xuan Deng , Hiroaki Fukuda , Bing Liu , Merck Sharp & Dohme Corp |
| msaenet | Multi-Step Adaptive Estimation Methods for Sparse Regressions Nan Xiao , Qing-Song Xu |
| oneclust | Maximum Homogeneity Clustering for Univariate Data Nan Xiao |
| pkglite | Compact Package Representations Nan Xiao , Yilong Zhang , Keaven Anderson , Amin Shirazi , Jeff Cheng , Danfeng Fu , Merck & Co. , Inc. , Rahway , NJ , USA , its affiliates |
| protr | Generating Various Numerical Representation Schemes for Protein Sequences Nan Xiao , Qing-Song Xu , Dong-Sheng Cao , Sebastian Mueller |
| r2rtf | Easily Create Production-Ready Rich Text Format (RTF) Table and Figure Yilong Zhang , Siruo Wang , Simiao Ye , Fansen Kong , Brian Lang , Benjamin Wang , Nan Xiao , Madhusudhan Ginnaram , Ruchitbhai Patel , Huei-Ling Chen , Peikun Wu , Uday Preetham Palukuru , Daniel Woodie , Sarad Nepal , Jane Liao , Jeff Cheng , Yirong Cao , Amin Shirazi , Merck Sharp & Dohme Corp |
| simtrial | Clinical Trial Simulation Keaven Anderson , Yilong Zhang , Yujie Zhao , Nan Xiao , Jianxiao Yang , Lili Ling , Xintong Li , Ruixue Wang , Yi Cui , Ping Yang , Yalin Zhu , Heng Zhou , Amin Shirazi , Cole Manschot , John Blischak , Merck & Co. , Inc. , Rahway , NJ , USA , its affiliates |
| stackgbm | Stacked Gradient Boosting Machines Nan Xiao |
| tidycwl | Tidy Common Workflow Language Tools and Workflows Soner Koc , Jeffrey Grover , Nan Xiao , Dennis Dean , Seven Bridges Genomics |